J5_7OPE_006
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7OPE|1|A|A|2091, 7OPE|1|A|A|2477, 7OPE|1|A|U|2638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OPE|1|A|G|2086
7OPE|1|A|A|2087
7OPE|1|A|A|2088
7OPE|1|A|A|2089
7OPE|1|A|G|2090
7OPE|1|A|A|2091
7OPE|1|A|C|2092
7OPE|1|A|C|2093
*
7OPE|1|A|G|2475
7OPE|1|A|G|2476
7OPE|1|A|A|2477
7OPE|1|A|U|2478
7OPE|1|A|A|2479
7OPE|1|A|A|2480
7OPE|1|A|C|2481
7OPE|1|A|A|2482
*
7OPE|1|A|U|2529
7OPE|1|A|C|2530
7OPE|1|A|G|2531
7OPE|1|A|A|2532
7OPE|1|A|U|2533
7OPE|1|A|G|2534
7OPE|1|A|U|2535
7OPE|1|A|C|2536
*
7OPE|1|A|G|2611
7OPE|1|A|G|2612
7OPE|1|A|U|2613
7OPE|1|A|U|2614
7OPE|1|A|C|2615
7OPE|1|A|A|2616
7OPE|1|A|G|2617
*
7OPE|1|A|C|2635
7OPE|1|A|G|2636
7OPE|1|A|G|2637
7OPE|1|A|U|2638
7OPE|1|A|C|2639
7OPE|1|A|C|2640
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain E
- 50S ribosomal protein L2
- Chain F
- 50S ribosomal protein L3
- Chain G
- 50S ribosomal protein L4
- Chain P
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L16
- Chain a
- 50S ribosomal protein L27
- Chain f
- 50S ribosomal protein L32
Coloring options: