J5_7P48_004
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 7P48|1|A|A|2089, 7P48|1|A|A|2475, 7P48|1|A|U|2476, 7P48|1|A|U|2612, 7P48|1|A|U|2636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7P48|1|A|G|2084
7P48|1|A|A|2085
7P48|1|A|A|2086
7P48|1|A|A|2087
7P48|1|A|G|2088
7P48|1|A|A|2089
7P48|1|A|C|2090
7P48|1|A|C|2091
*
7P48|1|A|G|2473
7P48|1|A|G|2474
7P48|1|A|A|2475
7P48|1|A|U|2476
7P48|1|A|A|2477
7P48|1|A|A|2478
7P48|1|A|C|2479
7P48|1|A|A|2480
*
7P48|1|A|U|2527
7P48|1|A|C|2528
7P48|1|A|G|2529
7P48|1|A|A|2530
7P48|1|A|U|2531
7P48|1|A|G|2532
7P48|1|A|U|2533
*
7P48|1|A|G|2610
7P48|1|A|U|2611
7P48|1|A|U|2612
7P48|1|A|C|2613
7P48|1|A|A|2614
7P48|1|A|G|2615
*
7P48|1|A|C|2633
7P48|1|A|G|2634
7P48|1|A|G|2635
7P48|1|A|U|2636
7P48|1|A|C|2637
7P48|1|A|C|2638
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 6
- ABC-F type ribosomal protection protein
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain J
- 50S ribosomal protein L15
- Chain Z
- 50S ribosomal protein L32
Coloring options: