J5_7P7Q_006
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7P7Q|1|A|A|2075, 7P7Q|1|A|A|2461, 7P7Q|1|A|U|2462, 7P7Q|1|A|U|2598, 7P7Q|1|A|U|2622
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7P7Q|1|A|G|2070
7P7Q|1|A|A|2071
7P7Q|1|A|A|2072
7P7Q|1|A|A|2073
7P7Q|1|A|G|2074
7P7Q|1|A|A|2075
7P7Q|1|A|C|2076
7P7Q|1|A|C|2077
*
7P7Q|1|A|G|2459
7P7Q|1|A|G|2460
7P7Q|1|A|A|2461
7P7Q|1|A|U|2462
7P7Q|1|A|A|2463
7P7Q|1|A|A|2464
7P7Q|1|A|C|2465
7P7Q|1|A|A|2466
*
7P7Q|1|A|U|2513
7P7Q|1|A|C|2514
7P7Q|1|A|G|2515
7P7Q|1|A|A|2516
7P7Q|1|A|U|2517
7P7Q|1|A|G|2518
7P7Q|1|A|U|2519
7P7Q|1|A|C|2520
*
7P7Q|1|A|G|2595
7P7Q|1|A|G|2596
7P7Q|1|A|U|2597
7P7Q|1|A|U|2598
7P7Q|1|A|C|2599
7P7Q|1|A|A|2600
7P7Q|1|A|G|2601
*
7P7Q|1|A|C|2619
7P7Q|1|A|G|2620
7P7Q|1|A|G|2621
7P7Q|1|A|U|2622
7P7Q|1|A|C|2623
7P7Q|1|A|C|2624
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain D
- Transfer RNA; tRNA
- Chain G
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L4
- Chain O
- 50S ribosomal protein L15
- Chain P
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L22
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