J5_7PJT_008

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CUGG*CGUG*CUUUC*GAAG*CAAG

Length

21 nucleotides

Bulged bases

7PJT|1|a|G|38

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|a|C|36
7PJT|1|a|U|37
7PJT|1|a|G|38
7PJT|1|a|G|39
*
7PJT|1|a|C|403
7PJT|1|a|G|404
7PJT|1|a|U|405
7PJT|1|a|G|406
*
7PJT|1|a|C|436
7PJT|1|a|U|437
7PJT|1|a|U|438
7PJT|1|a|U|439
7PJT|1|a|C|440
*
7PJT|1|a|G|497
7PJT|1|a|A|498
7PJT|1|a|A|499
7PJT|1|a|G|500
*
7PJT|1|a|C|545
7PJT|1|a|A|546
7PJT|1|a|A|547
7PJT|1|a|G|548

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain l

30S ribosomal protein S12