3D structure

PDB id
7PZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the vacant Candida albicans 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.32 Å

Loop

Sequence
CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AAAG
Length
35 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PZY|1|A|C|31
7PZY|1|A|U|32
7PZY|1|A|U|33
7PZY|1|A|G|34
7PZY|1|A|U|35
*
7PZY|1|A|A|471
7PZY|1|A|A|472
7PZY|1|A|A|473
7PZY|1|A|U|474
7PZY|1|A|A|475
7PZY|1|A|A|476
7PZY|1|A|C|477
*
7PZY|1|A|G|507
7PZY|1|A|G|508
7PZY|1|A|A|509
7PZY|1|A|A|510
7PZY|1|A|U|511
7PZY|1|A|G|512
7PZY|1|A|A|513
7PZY|1|A|G|514
*
7PZY|1|A|C|534
7PZY|1|A|G|535
7PZY|1|A|A|536
7PZY|1|A|G|537
7PZY|1|A|G|538
7PZY|1|A|A|539
7PZY|1|A|A|540
7PZY|1|A|C|541
7PZY|1|A|A|542
7PZY|1|A|A|543
7PZY|1|A|U|544
*
7PZY|1|A|A|590
7PZY|1|A|A|591
7PZY|1|A|A|592
7PZY|1|A|G|593

Current chains

Chain A
18S ribosomal RNA

Nearby chains

Chain K
Ribosomal 40S subunit protein S9B
Chain Y
Ribosomal 40S subunit protein S23B
Chain f
40S ribosomal protein S30

Coloring options:

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