J5_7Q0R_005
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 7Q0R|1|1|A|2382, 7Q0R|1|1|A|2789, 7Q0R|1|1|U|2845, 7Q0R|1|1|G|2846, 7Q0R|1|1|U|2950, 7Q0R|1|1|U|2951
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Q0R|1|1|A|2377
7Q0R|1|1|G|2378
7Q0R|1|1|A|2379
7Q0R|1|1|A|2380
7Q0R|1|1|G|2381
7Q0R|1|1|A|2382
7Q0R|1|1|C|2383
7Q0R|1|1|C|2384
*
7Q0R|1|1|G|2787
7Q0R|1|1|G|2788
7Q0R|1|1|A|2789
7Q0R|1|1|U|2790
7Q0R|1|1|A|2791
7Q0R|1|1|A|2792
7Q0R|1|1|C|2793
7Q0R|1|1|U|2794
7Q0R|1|1|G|2795
*
7Q0R|1|1|C|2839
7Q0R|1|1|U|2840
7Q0R|1|1|U|2841
7Q0R|1|1|C|2842
7Q0R|1|1|G|2843
7Q0R|1|1|A|2844
7Q0R|1|1|U|2845
7Q0R|1|1|G|2846
7Q0R|1|1|U|2847
7Q0R|1|1|C|2848
*
7Q0R|1|1|G|2923
7Q0R|1|1|G|2924
7Q0R|1|1|U|2925
7Q0R|1|1|U|2926
7Q0R|1|1|U|2927
7Q0R|1|1|A|2928
7Q0R|1|1|G|2929
*
7Q0R|1|1|U|2947
7Q0R|1|1|A|2948
7Q0R|1|1|G|2949
7Q0R|1|1|U|2950
7Q0R|1|1|U|2951
7Q0R|1|1|U|2952
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AB
- Ribosomal 60S subunit protein L28
- Chain AC
- 60S ribosomal protein L29
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain k
- 60S ribosomal protein L3
- Chain l
- Ribosomal 60S subunit protein L4B
Coloring options: