J5_7Q0R_009
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- ACCUUG*UUUCCU*ACUUU*AUAGAAUAGGA*UAAUGAU
- Length
- 35 nucleotides
- Bulged bases
- 7Q0R|1|A|U|637, 7Q0R|1|A|U|692, 7Q0R|1|A|U|797, 7Q0R|1|A|G|799, 7Q0R|1|A|A|841
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Q0R|1|A|A|634
7Q0R|1|A|C|635
7Q0R|1|A|C|636
7Q0R|1|A|U|637
7Q0R|1|A|U|638
7Q0R|1|A|G|639
*
7Q0R|1|A|U|691
7Q0R|1|A|U|692
7Q0R|1|A|U|693
7Q0R|1|A|C|694
7Q0R|1|A|C|695
7Q0R|1|A|U|696
*
7Q0R|1|A|A|725
7Q0R|1|A|C|726
7Q0R|1|A|U|727
7Q0R|1|A|U|728
7Q0R|1|A|U|729
*
7Q0R|1|A|A|791
7Q0R|1|A|U|792
7Q0R|1|A|A|793
7Q0R|1|A|G|794
7Q0R|1|A|A|795
7Q0R|1|A|A|796
7Q0R|1|A|U|797
7Q0R|1|A|A|798
7Q0R|1|A|G|799
7Q0R|1|A|G|800
7Q0R|1|A|A|801
*
7Q0R|1|A|U|839
7Q0R|1|A|A|840
7Q0R|1|A|A|841
7Q0R|1|A|U|842
7Q0R|1|A|G|843
7Q0R|1|A|A|844
7Q0R|1|A|U|845
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain I
- 40S ribosomal protein S7
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain O
- Ribosomal 40S subunit protein S13
- Chain X
- 40S ribosomal protein S22-A
- Chain z
- Ribosomal protein L19
Coloring options: