J5_7Q4K_001

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGG*CGUG*CUUU*AAG*CAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Q4K|1|AA|C|36
7Q4K|1|AA|U|37
7Q4K|1|AA|G|38
7Q4K|1|AA|G|39
*
7Q4K|1|AA|C|403
7Q4K|1|AA|G|404
7Q4K|1|AA|U|405
7Q4K|1|AA|G|406
*
7Q4K|1|AA|C|436
7Q4K|1|AA|U|437
7Q4K|1|AA|U|438
7Q4K|1|AA|U|439
*
7Q4K|1|AA|A|498
7Q4K|1|AA|A|499
7Q4K|1|AA|G|500
*
7Q4K|1|AA|C|545
7Q4K|1|AA|A|546
7Q4K|1|AA|A|547
7Q4K|1|AA|G|548

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AL

30S ribosomal protein S12