J5_7QGN_003
3D structure
- PDB id
- 7QGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.37 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAC*GAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 7QGN|1|0|A|109, 7QGN|1|0|C|352
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7QGN_003 not in the Motif Atlas
- Homologous match to J5_5J7L_003
- Geometric discrepancy: 0.078
- The information below is about J5_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_59910.6
- Basepair signature
- cWW-F-tSS-cSS-F-cWW-cWW-cWW-F-F-cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7QGN|1|0|C|58
7QGN|1|0|A|59
7QGN|1|0|A|60
7QGN|1|0|G|61
*
7QGN|1|0|C|106
7QGN|1|0|G|107
7QGN|1|0|G|108
7QGN|1|0|A|109
7QGN|1|0|C|110
7QGN|1|0|G|111
7QGN|1|0|G|112
7QGN|1|0|G|113
*
7QGN|1|0|C|314
7QGN|1|0|A|315
7QGN|1|0|C|316
*
7QGN|1|0|G|337
7QGN|1|0|A|338
7QGN|1|0|C|339
*
7QGN|1|0|G|350
7QGN|1|0|G|351
7QGN|1|0|C|352
7QGN|1|0|A|353
7QGN|1|0|G|354
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S16
- Chain X
- 50S ribosomal protein L14
- Chain u
- 30S ribosomal protein S20
Coloring options: