J5_7RQB_001
3D structure
- PDB id
- 7RQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- CGAUGAAG*CGAAUG*CG*CAC*GGG
- Length
- 22 nucleotides
- Bulged bases
- 7RQB|1|1A|U|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_35246.2
- Basepair signature
- cWW-F-F-F-cWW-tSH-tHH-F-tHS-cWW-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7RQB|1|1A|C|47
7RQB|1|1A|G|48
7RQB|1|1A|A|49
7RQB|1|1A|U|50
7RQB|1|1A|G|51
7RQB|1|1A|A|52
7RQB|1|1A|A|53
7RQB|1|1A|G|54
*
7RQB|1|1A|C|116
7RQB|1|1A|G|117
7RQB|1|1A|A|118
7RQB|1|1A|A|119
7RQB|1|1A|U|120
7RQB|1|1A|G|121
*
7RQB|1|1A|C|130
7RQB|1|1A|G|131
*
7RQB|1|1A|C|148
7RQB|1|1A|A|149
7RQB|1|1A|C|150
*
7RQB|1|1A|G|176
7RQB|1|1A|G|177
7RQB|1|1A|G|178
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L34
- Chain 1X
- 50S ribosomal protein L23
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