J5_7RQC_008
3D structure
- PDB id
- 7RQC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- CUGG*CUUG*CUGAACC*GGGUAAUAG*CGAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7RQC_008 not in the Motif Atlas
- Homologous match to J5_6CZR_007
- Geometric discrepancy: 0.101
- The information below is about J5_6CZR_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7RQC|1|1a|C|36
7RQC|1|1a|U|37
7RQC|1|1a|G|38
7RQC|1|1a|G|39
*
7RQC|1|1a|C|403
7RQC|1|1a|U|404
7RQC|1|1a|U|405
7RQC|1|1a|G|406
*
7RQC|1|1a|C|436
7RQC|1|1a|U|437
7RQC|1|1a|G|438
7RQC|1|1a|A|439
7RQC|1|1a|A|441
7RQC|1|1a|C|442
7RQC|1|1a|C|443
*
7RQC|1|1a|G|491
7RQC|1|1a|G|492
7RQC|1|1a|G|493
7RQC|1|1a|U|494
7RQC|1|1a|A|495
7RQC|1|1a|A|496
7RQC|1|1a|U|498
7RQC|1|1a|A|499
7RQC|1|1a|G|500
*
7RQC|1|1a|C|545
7RQC|1|1a|G|546
7RQC|1|1a|A|547
7RQC|1|1a|G|548
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1d
- 30S ribosomal protein S4
- Chain 1l
- 30S ribosomal protein S12
Coloring options: