J5_7RQC_014

3D structure

PDB id

7RQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

7RQC|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQC|1|2A|C|601
7RQC|1|2A|G|602
7RQC|1|2A|A|603
7RQC|1|2A|G|604
*
7RQC|1|2A|C|624
7RQC|1|2A|G|625
7RQC|1|2A|U|626
7RQC|1|2A|A|627
7RQC|1|2A|G|628
*
7RQC|1|2A|C|635
7RQC|1|2A|G|636
7RQC|1|2A|A|637
7RQC|1|2A|G|638
*
7RQC|1|2A|C|650
7RQC|1|2A|G|651
7RQC|1|2A|C|652
7RQC|1|2A|A|652|||A
7RQC|1|2A|A|652|||B
7RQC|1|2A|G|652|||C
*
7RQC|1|2A|C|652|||V
7RQC|1|2A|A|653
7RQC|1|2A|A|654
7RQC|1|2A|A|655
7RQC|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15