J5_7S9U_002

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCAAACC*GGGGUUGUAGGAC*GGAUCCUGAGUAC*GGAAUCCG*CAAG

Length

45 nucleotides

Bulged bases

7S9U|1|A|U|299, 7S9U|1|A|U|301, 7S9U|1|A|C|452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S9U|1|A|C|271
7S9U|1|A|C|272
7S9U|1|A|A|273
7S9U|1|A|A|274
7S9U|1|A|A|275
7S9U|1|A|C|276
7S9U|1|A|C|277
*
7S9U|1|A|G|294
7S9U|1|A|G|295
7S9U|1|A|G|296
7S9U|1|A|G|297
7S9U|1|A|U|298
7S9U|1|A|U|299
7S9U|1|A|G|300
7S9U|1|A|U|301
7S9U|1|A|A|302
7S9U|1|A|G|303
7S9U|1|A|G|304
7S9U|1|A|A|305
7S9U|1|A|C|306
*
7S9U|1|A|G|410
7S9U|1|A|G|411
7S9U|1|A|A|412
7S9U|1|A|U|413
7S9U|1|A|C|414
7S9U|1|A|C|415
7S9U|1|A|U|416
7S9U|1|A|G|417
7S9U|1|A|A|418
7S9U|1|A|G|419
7S9U|1|A|U|420
7S9U|1|A|A|421
7S9U|1|A|C|422
*
7S9U|1|A|G|446
7S9U|1|A|G|447
7S9U|1|A|A|448
7S9U|1|A|A|449
7S9U|1|A|U|450
7S9U|1|A|C|451
7S9U|1|A|C|452
7S9U|1|A|G|453
*
7S9U|1|A|C|468
7S9U|1|A|A|469
7S9U|1|A|A|470
7S9U|1|A|G|471

Current chains

Chain A

RNA (2436-MER)

Nearby chains