Loop J5_7SAE

3D structure

PDB id: 7SAE (explore in PDB, NAKB, or RNA 3D Hub)
Description: 44SR70P Class1 ribosomal particle
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å

Loop

Sequence: UUUA*UUUGACUGGGGCGGUCG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
Length: 52 nucleotides
Bulged bases: 7SAE|1|A|U|2105, 7SAE|1|A|G|2279, 7SAE|1|A|U|2419, 7SAE|1|A|G|2457, 7SAE|1|A|A|2459, 7SAE|1|A|U|2460
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7SAE|1|A|U|2103
7SAE|1|A|U|2104
7SAE|1|A|U|2105
7SAE|1|A|A|2106
*
7SAE|1|A|U|2272
7SAE|1|A|U|2273
7SAE|1|A|U|2274
7SAE|1|A|G|2275
7SAE|1|A|A|2276
7SAE|1|A|C|2277
7SAE|1|A|U|2278
7SAE|1|A|G|2279
7SAE|1|A|G|2280
7SAE|1|A|G|2281
7SAE|1|A|G|2282
7SAE|1|A|C|2283
7SAE|1|A|G|2284
7SAE|1|A|G|2285
7SAE|1|A|U|2286
7SAE|1|A|C|2287
7SAE|1|A|G|2288
*
7SAE|1|A|C|2310
7SAE|1|A|G|2311
7SAE|1|A|C|2312
7SAE|1|A|C|2313
*
7SAE|1|A|G|2413
7SAE|1|A|C|2414
7SAE|1|A|U|2415
7SAE|1|A|U|2416
7SAE|1|A|A|2417
7SAE|1|A|G|2418
7SAE|1|A|U|2419
7SAE|1|A|G|2420
7SAE|1|A|A|2421
7SAE|1|A|U|2422
7SAE|1|A|C|2423
7SAE|1|A|C|2424
*
7SAE|1|A|G|2450
7SAE|1|A|C|2451
7SAE|1|A|U|2452
7SAE|1|A|C|2453
7SAE|1|A|A|2454
7SAE|1|A|A|2455
7SAE|1|A|C|2456
7SAE|1|A|G|2457
7SAE|1|A|G|2458
7SAE|1|A|A|2459
7SAE|1|A|U|2460
7SAE|1|A|A|2461
7SAE|1|A|A|2462
7SAE|1|A|A|2463
7SAE|1|A|A|2464

Current chains

Chain A: RNA (2434-MER)

Nearby chains

Chain C: 50S ribosomal protein L2
Chain L: 50S ribosomal protein L15
Chain V: 50S ribosomal protein L27

J5_7SAE_008