J5_7SFR_002

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUAAAC*GGGUUGUG*CGAGUAG*UGAAUCCG*UAAG

Length

33 nucleotides

Bulged bases

7SFR|1|A|U|319, 7SFR|1|A|C|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SFR|1|A|C|270
7SFR|1|A|U|271
7SFR|1|A|A|272
7SFR|1|A|A|273
7SFR|1|A|A|274
7SFR|1|A|C|275
*
7SFR|1|A|G|313
7SFR|1|A|G|314
7SFR|1|A|G|315
7SFR|1|A|U|316
7SFR|1|A|U|317
7SFR|1|A|G|318
7SFR|1|A|U|319
7SFR|1|A|G|320
*
7SFR|1|A|C|458
7SFR|1|A|G|459
7SFR|1|A|A|460
7SFR|1|A|G|461
7SFR|1|A|U|462
7SFR|1|A|A|463
7SFR|1|A|G|464
*
7SFR|1|A|U|488
7SFR|1|A|G|489
7SFR|1|A|A|490
7SFR|1|A|A|491
7SFR|1|A|U|492
7SFR|1|A|C|493
7SFR|1|A|C|494
7SFR|1|A|G|495
*
7SFR|1|A|U|510
7SFR|1|A|A|511
7SFR|1|A|A|512
7SFR|1|A|G|513

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9

Chain X

50S ribosomal protein L28