J5_7TOR_012
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UG*CGAUGAAG*CGAACG*CG*UA
- Length
- 20 nucleotides
- Bulged bases
- 7TOR|1|A58S|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOR|1|A28S|U|20
7TOR|1|A28S|G|21
*
7TOR|1|A58S|C|35
7TOR|1|A58S|G|36
7TOR|1|A58S|A|37
7TOR|1|A58S|U|38
7TOR|1|A58S|G|39
7TOR|1|A58S|A|40
7TOR|1|A58S|A|41
7TOR|1|A58S|G|42
*
7TOR|1|A58S|C|101
7TOR|1|A58S|G|102
7TOR|1|A58S|A|103
7TOR|1|A58S|A|104
7TOR|1|A58S|C|105
7TOR|1|A58S|G|106
*
7TOR|1|A58S|C|113
7TOR|1|A58S|G|114
*
7TOR|1|A58S|U|136
7TOR|1|A58S|A|137
Current chains
- Chain A28S
- 28S rRNA
- Chain A58S
- 5.8S rRNA
Nearby chains
- Chain AL15
- 60S ribosomal protein L15
- Chain AL25
- uL23
- Chain AL35
- 60S ribosomal protein L35
- Chain AL37
- 60S ribosomal protein L37
- Chain AL39
- 60S ribosomal protein L39
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