J5_7TQL_007
3D structure
- PDB id
- 7TQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGGAUCUC*GCGUU*AUGGAAUAGG*CAUGAUUAAGA*UA
- Length
- 36 nucleotides
- Bulged bases
- 7TQL|1|2|C|687, 7TQL|1|2|U|688, 7TQL|1|2|U|871, 7TQL|1|2|G|873, 7TQL|1|2|A|913, 7TQL|1|2|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TQL|1|2|U|682
7TQL|1|2|G|683
7TQL|1|2|G|684
7TQL|1|2|A|685
7TQL|1|2|U|686
7TQL|1|2|C|687
7TQL|1|2|U|688
7TQL|1|2|C|746
*
7TQL|1|2|G|796
7TQL|1|2|C|797
7TQL|1|2|G|798
7TQL|1|2|U|799
7TQL|1|2|U|800
*
7TQL|1|2|A|865
7TQL|1|2|U|866
7TQL|1|2|G|867
7TQL|1|2|G|868
7TQL|1|2|A|869
7TQL|1|2|A|870
7TQL|1|2|U|871
7TQL|1|2|A|872
7TQL|1|2|G|873
7TQL|1|2|G|874
*
7TQL|1|2|C|912
7TQL|1|2|A|913
7TQL|1|2|U|914
7TQL|1|2|G|915
7TQL|1|2|A|916
7TQL|1|2|U|917
7TQL|1|2|U|918
7TQL|1|2|A|919
7TQL|1|2|A|920
7TQL|1|2|G|921
7TQL|1|2|A|922
*
7TQL|1|2|U|1022
7TQL|1|2|A|1023
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S4, X isoform
- Chain H
- 40S ribosomal protein S7
- Chain L
- 40S ribosomal protein S11
- Chain N
- ribosomal protein uS15
- Chain W
- 40S ribosomal protein S15a
- Chain X
- 40S ribosomal protein S23
- Chain b
- 40S ribosomal protein S27
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