3D structure

PDB id
7TTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAAAGACC*GGAUAACAG*CCUCGAUGU*GUUCAG*CGGUCC
Length
38 nucleotides
Bulged bases
7TTU|1|1|A|2089, 7TTU|1|1|A|2475, 7TTU|1|1|U|2476, 7TTU|1|1|U|2612, 7TTU|1|1|U|2636, 7TTU|1|1|C|2637
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7TTU|1|1|G|2084
7TTU|1|1|A|2085
7TTU|1|1|A|2086
7TTU|1|1|A|2087
7TTU|1|1|G|2088
7TTU|1|1|A|2089
7TTU|1|1|C|2090
7TTU|1|1|C|2091
*
7TTU|1|1|G|2473
7TTU|1|1|G|2474
7TTU|1|1|A|2475
7TTU|1|1|U|2476
7TTU|1|1|A|2477
7TTU|1|1|A|2478
7TTU|1|1|C|2479
7TTU|1|1|A|2480
7TTU|1|1|G|2481
*
7TTU|1|1|C|2525
7TTU|1|1|C|2526
7TTU|1|1|U|2527
7TTU|1|1|C|2528
7TTU|1|1|G|2529
7TTU|1|1|A|2530
7TTU|1|1|U|2531
7TTU|1|1|G|2532
7TTU|1|1|U|2533
*
7TTU|1|1|G|2610
7TTU|1|1|U|2611
7TTU|1|1|U|2612
7TTU|1|1|C|2613
7TTU|1|1|A|2614
7TTU|1|1|G|2615
*
7TTU|1|1|C|2633
7TTU|1|1|G|2634
7TTU|1|1|G|2635
7TTU|1|1|U|2636
7TTU|1|1|C|2637
7TTU|1|1|C|2638

Current chains

Chain 1
23S rRNA

Nearby chains

Chain B
50S ribosomal protein L2
Chain L
50S ribosomal protein L3
Chain N
50S ribosomal protein L32
Chain S
50S ribosomal protein L4
Chain X
50S ribosomal protein L15
Chain Y
50S ribosomal protein L16

Coloring options:

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