J5_7U2I_002

3D structure

PDB id

7U2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

7U2I|1|1A|U|272|||A, 7U2I|1|1A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7U2I|1|1A|C|268
7U2I|1|1A|U|269
7U2I|1|1A|A|270
7U2I|1|1A|A|271
7U2I|1|1A|A|271|||A
7U2I|1|1A|C|271|||B
*
7U2I|1|1A|G|271|||V
7U2I|1|1A|G|271|||W
7U2I|1|1A|G|271|||X
7U2I|1|1A|U|271|||Y
7U2I|1|1A|C|271|||Z
7U2I|1|1A|G|272
7U2I|1|1A|U|272|||A
7U2I|1|1A|G|272|||B
*
7U2I|1|1A|C|366
7U2I|1|1A|G|370
7U2I|1|1A|A|371
7U2I|1|1A|G|372
7U2I|1|1A|U|373
7U2I|1|1A|A|374
7U2I|1|1A|C|375
*
7U2I|1|1A|G|399
7U2I|1|1A|G|400
7U2I|1|1A|A|401
7U2I|1|1A|A|402
7U2I|1|1A|U|403
7U2I|1|1A|C|404
7U2I|1|1A|U|405
7U2I|1|1A|G|406
*
7U2I|1|1A|U|421
7U2I|1|1A|A|422
7U2I|1|1A|A|423
7U2I|1|1A|G|424

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L28

Chain 1I

50S ribosomal protein L9