J5_7UG7_002
3D structure
- PDB id
- 7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7UG7_002 not in the Motif Atlas
- Homologous match to J5_5J7L_002
- Geometric discrepancy: 0.0671
- The information below is about J5_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_67416.1
- Basepair signature
- cWW-F-F-F-cWW-tHW-F-tHW-tSS-cWW-cHW-cWW-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
7UG7|1|16|C|36
7UG7|1|16|U|37
7UG7|1|16|G|38
7UG7|1|16|G|39
*
7UG7|1|16|C|403
7UG7|1|16|G|404
7UG7|1|16|U|405
7UG7|1|16|G|406
*
7UG7|1|16|C|436
7UG7|1|16|U|437
7UG7|1|16|U|438
7UG7|1|16|U|439
7UG7|1|16|C|440
7UG7|1|16|A|441
7UG7|1|16|G|442
*
7UG7|1|16|C|492
7UG7|1|16|A|493
7UG7|1|16|G|494
7UG7|1|16|A|495
7UG7|1|16|A|496
7UG7|1|16|G|497
7UG7|1|16|A|498
7UG7|1|16|A|499
7UG7|1|16|G|500
*
7UG7|1|16|C|545
7UG7|1|16|A|546
7UG7|1|16|A|547
7UG7|1|16|G|548
Current chains
- Chain 16
- 16S rRNA
Nearby chains
- Chain EF
- Elongation factor G
- Chain SD
- 30S ribosomal protein S4
- Chain SL
- 30S ribosomal protein S12
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