3D structure

PDB id
7UVV (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CGAUGAAA*UGAAUG*CA*UAU*AGG
Length
22 nucleotides
Bulged bases
7UVV|1|A|U|57
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J5_7UVV_001 not in the Motif Atlas
Homologous match to J5_5J7L_013
Geometric discrepancy: 0.0913
The information below is about J5_5J7L_013
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J5_01737.2
Basepair signature
cWW-F-cWW-F-cWW-tSH-tHH-tHS-cWW-cWW-cWW-F
Number of instances in this motif group
5

Unit IDs

7UVV|1|A|C|54
7UVV|1|A|G|55
7UVV|1|A|A|56
7UVV|1|A|U|57
7UVV|1|A|G|58
7UVV|1|A|A|59
7UVV|1|A|A|60
7UVV|1|A|A|61
*
7UVV|1|A|U|123
7UVV|1|A|G|124
7UVV|1|A|A|125
7UVV|1|A|A|126
7UVV|1|A|U|127
7UVV|1|A|G|128
*
7UVV|1|A|C|137
7UVV|1|A|A|138
*
7UVV|1|A|U|155
7UVV|1|A|A|156
7UVV|1|A|U|157
*
7UVV|1|A|A|183
7UVV|1|A|G|184
7UVV|1|A|G|185

Current chains

Chain A
23s ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L34

Coloring options:


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