J5_7UVY_005
3D structure
- PDB id
- 7UVY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCG(2MA)(PSU)GUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7UVY|1|A|A|2058, 7UVY|1|A|A|2444, 7UVY|1|A|U|2445, 7UVY|1|A|G|2501, 7UVY|1|A|U|2605, 7UVY|1|A|C|2606
- QA status
- Modified nucleotides: 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UVY|1|A|G|2053
7UVY|1|A|A|2054
7UVY|1|A|A|2055
7UVY|1|A|A|2056
7UVY|1|A|G|2057
7UVY|1|A|A|2058
7UVY|1|A|C|2059
7UVY|1|A|C|2060
*
7UVY|1|A|G|2442
7UVY|1|A|G|2443
7UVY|1|A|A|2444
7UVY|1|A|U|2445
7UVY|1|A|A|2446
7UVY|1|A|A|2447
7UVY|1|A|C|2448
7UVY|1|A|A|2449
*
7UVY|1|A|U|2496
7UVY|1|A|C|2497
7UVY|1|A|G|2498
7UVY|1|A|2MA|2499
7UVY|1|A|PSU|2500
7UVY|1|A|G|2501
7UVY|1|A|U|2502
7UVY|1|A|C|2503
*
7UVY|1|A|G|2578
7UVY|1|A|G|2579
7UVY|1|A|U|2580
7UVY|1|A|U|2581
7UVY|1|A|U|2582
7UVY|1|A|A|2583
7UVY|1|A|G|2584
*
7UVY|1|A|C|2602
7UVY|1|A|G|2603
7UVY|1|A|G|2604
7UVY|1|A|U|2605
7UVY|1|A|C|2606
7UVY|1|A|C|2607
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain K
- 50S ribosomal protein L15
- Chain L
- 50S ribosomal protein L16
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
- Chain v
- Transfer RNA; tRNA
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