J5_7UVY_008
3D structure
- PDB id
- 7UVY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- CUGG*CGUG*CUUUAAG*CAGAAUAAG*CGAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7UVY_008 not in the Motif Atlas
- Homologous match to J5_5J7L_002
- Geometric discrepancy: 0.08
- The information below is about J5_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_67416.1
- Basepair signature
- cWW-F-F-F-cWW-tHW-F-tHW-tSS-cWW-cHW-cWW-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
7UVY|1|a|C|38
7UVY|1|a|U|39
7UVY|1|a|G|40
7UVY|1|a|G|41
*
7UVY|1|a|C|399
7UVY|1|a|G|400
7UVY|1|a|U|401
7UVY|1|a|G|402
*
7UVY|1|a|C|432
7UVY|1|a|U|433
7UVY|1|a|U|434
7UVY|1|a|U|435
7UVY|1|a|A|436
7UVY|1|a|A|437
7UVY|1|a|G|438
*
7UVY|1|a|C|489
7UVY|1|a|A|490
7UVY|1|a|G|491
7UVY|1|a|A|492
7UVY|1|a|A|493
7UVY|1|a|U|494
7UVY|1|a|A|495
7UVY|1|a|A|496
7UVY|1|a|G|497
*
7UVY|1|a|C|542
7UVY|1|a|G|543
7UVY|1|a|A|544
7UVY|1|a|G|545
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
Coloring options: