J5_7V08_005
3D structure
- PDB id
- 7V08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.36 Å
Loop
- Sequence
- CGG*CUAAG*UUGAUU*AC*GG
- Length
- 18 nucleotides
- Bulged bases
- 7V08|1|1|U|2716
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7V08|1|1|C|2622
7V08|1|1|G|2623
7V08|1|1|G|2624
*
7V08|1|1|C|2654
7V08|1|1|U|2655
7V08|1|1|A|2656
7V08|1|1|A|2657
7V08|1|1|G|2658
*
7V08|1|1|U|2712
7V08|1|1|U|2713
7V08|1|1|G|2714
7V08|1|1|A|2715
7V08|1|1|U|2716
7V08|1|1|U|2717
*
7V08|1|1|A|2740
7V08|1|1|C|2741
*
7V08|1|1|G|2753
7V08|1|1|G|2754
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain m
- Nucleolar GTP-binding protein 2
- Chain r
- Ribosome biogenesis protein NSA2
- Chain v
- Ribosome production factor 2 homolog
- Chain w
- Ribosome biogenesis regulatory protein
- Chain x
- RSA4 isoform 1
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