J5_7WTS_002

3D structure

PDB id

7WTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State UTP14

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUAG

Length

35 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTS|1|2|C|30
7WTS|1|2|U|31
7WTS|1|2|U|32
7WTS|1|2|G|33
7WTS|1|2|U|34
*
7WTS|1|2|A|521
7WTS|1|2|A|522
7WTS|1|2|A|523
7WTS|1|2|U|524
7WTS|1|2|A|525
7WTS|1|2|A|526
7WTS|1|2|C|527
*
7WTS|1|2|G|558
7WTS|1|2|G|559
7WTS|1|2|A|560
7WTS|1|2|A|561
7WTS|1|2|U|562
7WTS|1|2|G|563
7WTS|1|2|A|564
7WTS|1|2|G|565
*
7WTS|1|2|C|585
7WTS|1|2|G|586
7WTS|1|2|A|587
7WTS|1|2|G|588
7WTS|1|2|G|589
7WTS|1|2|A|590
7WTS|1|2|U|591
7WTS|1|2|C|592
7WTS|1|2|C|593
7WTS|1|2|A|594
7WTS|1|2|U|595
*
7WTS|1|2|A|641
7WTS|1|2|U|642
7WTS|1|2|A|643
7WTS|1|2|G|644

Current chains

Chain 2

18S rRNA

Nearby chains

Chain J

40S ribosomal protein S9

Chain X

40S ribosomal protein S23

Chain e

40S ribosomal protein S30

Chain u

Pre-rRNA-processing protein TSR1 homolog