J5_7WTS_004

3D structure

PDB id

7WTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State UTP14

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCGCUCG*CGGG*UG*CCG*CGACC

Length

22 nucleotides

Bulged bases

7WTS|1|2|G|126, 7WTS|1|2|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTS|1|2|G|123
7WTS|1|2|U|124
7WTS|1|2|C|125
7WTS|1|2|G|126
7WTS|1|2|C|127
7WTS|1|2|U|128
7WTS|1|2|C|129
7WTS|1|2|G|130
*
7WTS|1|2|C|182
7WTS|1|2|G|183
7WTS|1|2|G|184
7WTS|1|2|G|185
*
7WTS|1|2|U|214
7WTS|1|2|G|215
*
7WTS|1|2|C|310
7WTS|1|2|C|311
7WTS|1|2|G|312
*
7WTS|1|2|C|337
7WTS|1|2|G|338
7WTS|1|2|A|339
7WTS|1|2|C|340
7WTS|1|2|C|341

Current chains

Chain 2

18S rRNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain G

40S ribosomal protein S6

Chain I

40S ribosomal protein S8