J5_7WTW_004

3D structure

PDB id

7WTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCGCUCG*CGGG*UG*CCG*CGACC

Length

22 nucleotides

Bulged bases

7WTW|1|2|G|126, 7WTW|1|2|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTW|1|2|G|123
7WTW|1|2|U|124
7WTW|1|2|C|125
7WTW|1|2|G|126
7WTW|1|2|C|127
7WTW|1|2|U|128
7WTW|1|2|C|129
7WTW|1|2|G|130
*
7WTW|1|2|C|182
7WTW|1|2|G|183
7WTW|1|2|G|184
7WTW|1|2|G|185
*
7WTW|1|2|U|214
7WTW|1|2|G|215
*
7WTW|1|2|C|310
7WTW|1|2|C|311
7WTW|1|2|G|312
*
7WTW|1|2|C|337
7WTW|1|2|G|338
7WTW|1|2|A|339
7WTW|1|2|C|340
7WTW|1|2|C|341

Current chains

Chain 2

18S rRNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain G

40S ribosomal protein S6

Chain I

40S ribosomal protein S8