J5_7XAM_005

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7XAM|1|A|C|694
7XAM|1|A|G|695
7XAM|1|A|A|696
7XAM|1|A|G|697
*
7XAM|1|A|C|718
7XAM|1|A|G|719
7XAM|1|A|C|720
7XAM|1|A|A|721
7XAM|1|A|G|722
*
7XAM|1|A|C|729
7XAM|1|A|G|730
7XAM|1|A|A|731
7XAM|1|A|G|732
*
7XAM|1|A|C|744
7XAM|1|A|G|745
7XAM|1|A|U|746
7XAM|1|A|A|747
7XAM|1|A|U|748
7XAM|1|A|C|749
*
7XAM|1|A|G|766
7XAM|1|A|U|767
7XAM|1|A|G|768
7XAM|1|A|U|769
7XAM|1|A|A|770
7XAM|1|A|G|771

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain M

50S ribosomal protein L15

Chain e

50S ribosomal protein L35