J5_7Y41_005

3D structure

PDB id

7Y41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Y41|1|A|C|694
7Y41|1|A|G|695
7Y41|1|A|A|696
7Y41|1|A|G|697
*
7Y41|1|A|C|718
7Y41|1|A|G|719
7Y41|1|A|C|720
7Y41|1|A|A|721
7Y41|1|A|G|722
*
7Y41|1|A|C|729
7Y41|1|A|G|730
7Y41|1|A|A|731
7Y41|1|A|G|732
*
7Y41|1|A|C|744
7Y41|1|A|G|745
7Y41|1|A|U|746
7Y41|1|A|A|747
7Y41|1|A|U|748
7Y41|1|A|C|749
*
7Y41|1|A|G|766
7Y41|1|A|U|767
7Y41|1|A|G|768
7Y41|1|A|U|769
7Y41|1|A|A|770
7Y41|1|A|G|771

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain M

50S ribosomal protein L15

Chain e

50S ribosomal protein L35