J5_7Z3N_013

3D structure

PDB id

7Z3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACCUUG*UUUCCU*ACUUU*AUAGAAUAGGA*UAAUGAU

Length

35 nucleotides

Bulged bases

7Z3N|1|2|C|635, 7Z3N|1|2|U|636, 7Z3N|1|2|U|689, 7Z3N|1|2|C|691, 7Z3N|1|2|C|692, 7Z3N|1|2|U|811, 7Z3N|1|2|G|813, 7Z3N|1|2|A|854

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Z3N|1|2|A|633
7Z3N|1|2|C|634
7Z3N|1|2|C|635
7Z3N|1|2|U|636
7Z3N|1|2|U|637
7Z3N|1|2|G|638
*
7Z3N|1|2|U|688
7Z3N|1|2|U|689
7Z3N|1|2|U|690
7Z3N|1|2|C|691
7Z3N|1|2|C|692
7Z3N|1|2|U|693
*
7Z3N|1|2|A|739
7Z3N|1|2|C|740
7Z3N|1|2|U|741
7Z3N|1|2|U|742
7Z3N|1|2|U|743
*
7Z3N|1|2|A|805
7Z3N|1|2|U|806
7Z3N|1|2|A|807
7Z3N|1|2|G|808
7Z3N|1|2|A|809
7Z3N|1|2|A|810
7Z3N|1|2|U|811
7Z3N|1|2|A|812
7Z3N|1|2|G|813
7Z3N|1|2|G|814
7Z3N|1|2|A|815
*
7Z3N|1|2|U|852
7Z3N|1|2|A|853
7Z3N|1|2|A|854
7Z3N|1|2|U|855
7Z3N|1|2|G|856
7Z3N|1|2|A|857
7Z3N|1|2|U|858

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LR

Ribosomal protein L19

Chain SH

40S ribosomal protein S7

Chain SL

40S ribosomal protein S11-like protein

Chain SN

40S ribosomal protein S13-like protein

Chain SW

40S ribosomal protein S22-like protein