J5_7ZAH_001

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAU*AGUG*CUUUUC*GGAAUAAG*(4AC)GAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4AC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|C|42
7ZAH|1|2|U|43
7ZAH|1|2|A|44
7ZAH|1|2|U|45
*
7ZAH|1|2|A|412
7ZAH|1|2|G|413
7ZAH|1|2|U|414
7ZAH|1|2|G|415
*
7ZAH|1|2|C|433
7ZAH|1|2|U|434
7ZAH|1|2|U|435
7ZAH|1|2|U|436
7ZAH|1|2|U|437
7ZAH|1|2|C|438
*
7ZAH|1|2|G|458
7ZAH|1|2|G|459
7ZAH|1|2|A|460
7ZAH|1|2|A|461
7ZAH|1|2|U|462
7ZAH|1|2|A|463
7ZAH|1|2|A|464
7ZAH|1|2|G|465
*
7ZAH|1|2|4AC|511
7ZAH|1|2|G|512
7ZAH|1|2|A|513
7ZAH|1|2|G|514

Current chains

Chain 2

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain N

30S ribosomal protein S12

Chain V

30S ribosomal protein S24e