J5_7ZRS_010
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 7ZRS|1|5|A|2405, 7ZRS|1|5|A|2818, 7ZRS|1|5|G|2875, 7ZRS|1|5|U|2979, 7ZRS|1|5|U|2980
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZRS|1|5|A|2400
7ZRS|1|5|G|2401
7ZRS|1|5|A|2402
7ZRS|1|5|A|2403
7ZRS|1|5|G|2404
7ZRS|1|5|A|2405
7ZRS|1|5|C|2406
7ZRS|1|5|C|2407
*
7ZRS|1|5|G|2816
7ZRS|1|5|G|2817
7ZRS|1|5|A|2818
7ZRS|1|5|U|2819
7ZRS|1|5|A|2820
7ZRS|1|5|A|2821
7ZRS|1|5|C|2822
7ZRS|1|5|U|2823
7ZRS|1|5|G|2824
*
7ZRS|1|5|C|2868
7ZRS|1|5|U|2869
7ZRS|1|5|U|2870
7ZRS|1|5|C|2871
7ZRS|1|5|G|2872
7ZRS|1|5|A|2873
7ZRS|1|5|U|2874
7ZRS|1|5|G|2875
7ZRS|1|5|U|2876
7ZRS|1|5|C|2877
*
7ZRS|1|5|G|2952
7ZRS|1|5|G|2953
7ZRS|1|5|U|2954
7ZRS|1|5|U|2955
7ZRS|1|5|U|2956
7ZRS|1|5|A|2957
7ZRS|1|5|G|2958
*
7ZRS|1|5|U|2976
7ZRS|1|5|A|2977
7ZRS|1|5|G|2978
7ZRS|1|5|U|2979
7ZRS|1|5|U|2980
7ZRS|1|5|U|2981
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein L2-A
- Chain BB
- 60S ribosomal protein L3
- Chain BC
- RPL4A isoform 1
- Chain BI
- RPL10 isoform 1
- Chain BO
- 60S ribosomal protein L17-A
- Chain Ba
- 60S ribosomal protein L29
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