J5_7ZUX_009
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 7ZUX|1|5|A|2405, 7ZUX|1|5|A|2818, 7ZUX|1|5|U|2874, 7ZUX|1|5|G|2875, 7ZUX|1|5|U|2955, 7ZUX|1|5|U|2979, 7ZUX|1|5|U|2980
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZUX|1|5|A|2400
7ZUX|1|5|G|2401
7ZUX|1|5|A|2402
7ZUX|1|5|A|2403
7ZUX|1|5|G|2404
7ZUX|1|5|A|2405
7ZUX|1|5|C|2406
7ZUX|1|5|C|2407
*
7ZUX|1|5|G|2816
7ZUX|1|5|G|2817
7ZUX|1|5|A|2818
7ZUX|1|5|U|2819
7ZUX|1|5|A|2820
7ZUX|1|5|A|2821
7ZUX|1|5|C|2822
7ZUX|1|5|U|2823
7ZUX|1|5|G|2824
*
7ZUX|1|5|C|2868
7ZUX|1|5|U|2869
7ZUX|1|5|U|2870
7ZUX|1|5|C|2871
7ZUX|1|5|G|2872
7ZUX|1|5|A|2873
7ZUX|1|5|U|2874
7ZUX|1|5|G|2875
7ZUX|1|5|U|2876
7ZUX|1|5|C|2877
*
7ZUX|1|5|G|2952
7ZUX|1|5|G|2953
7ZUX|1|5|U|2954
7ZUX|1|5|U|2955
7ZUX|1|5|U|2956
7ZUX|1|5|A|2957
7ZUX|1|5|G|2958
*
7ZUX|1|5|U|2976
7ZUX|1|5|A|2977
7ZUX|1|5|G|2978
7ZUX|1|5|U|2979
7ZUX|1|5|U|2980
7ZUX|1|5|U|2981
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain EA
- 60S ribosomal protein L2-A
- Chain EB
- 60S ribosomal protein L3
- Chain EC
- 60S ribosomal protein L4-A
- Chain EI
- 60S ribosomal protein L10
- Chain EZ
- 60S ribosomal protein L28
- Chain Ea
- 60S ribosomal protein L29
Coloring options: