J5_7ZUX_010
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UUGA*UUUG*CA*UG*CAGAAAA
- Length
- 19 nucleotides
- Bulged bases
- 7ZUX|1|5|G|2419, 7ZUX|1|5|A|2800, 7ZUX|1|5|G|2801, 7ZUX|1|5|A|2802, 7ZUX|1|5|A|2803
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7ZUX_010 not in the Motif Atlas
- Homologous match to J5_8P9A_015
- Geometric discrepancy: 0.1857
- The information below is about J5_8P9A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_96125.1
- Basepair signature
- cWW-cWH-cWH-tSS-cWW-cWW-cWW-F-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ZUX|1|5|U|2417
7ZUX|1|5|U|2418
7ZUX|1|5|G|2419
7ZUX|1|5|A|2420
*
7ZUX|1|5|U|2612
7ZUX|1|5|U|2613
7ZUX|1|5|U|2614
7ZUX|1|5|G|2615
*
7ZUX|1|5|C|2628
7ZUX|1|5|A|2629
*
7ZUX|1|5|U|2651
7ZUX|1|5|G|2652
*
7ZUX|1|5|C|2799
7ZUX|1|5|A|2800
7ZUX|1|5|G|2801
7ZUX|1|5|A|2802
7ZUX|1|5|A|2803
7ZUX|1|5|A|2804
7ZUX|1|5|A|2805
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain EA
- 60S ribosomal protein L2-A
- Chain EM
- 60S ribosomal protein L15-A
- Chain EP
- 60S ribosomal protein L18-A
- Chain ES
- 60S ribosomal protein L21-A
- Chain EZ
- 60S ribosomal protein L28
- Chain En
- 60S ribosomal protein L42-A
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