J5_7ZW0_001

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AUAG

Length

35 nucleotides

Bulged bases

7ZW0|1|2|A|541, 7ZW0|1|2|A|542, 7ZW0|1|2|A|544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZW0|1|2|C|31
7ZW0|1|2|U|32
7ZW0|1|2|U|33
7ZW0|1|2|G|34
7ZW0|1|2|U|35
*
7ZW0|1|2|A|473
7ZW0|1|2|A|474
7ZW0|1|2|A|475
7ZW0|1|2|U|476
7ZW0|1|2|A|477
7ZW0|1|2|A|478
7ZW0|1|2|C|479
*
7ZW0|1|2|G|509
7ZW0|1|2|G|510
7ZW0|1|2|A|511
7ZW0|1|2|A|512
7ZW0|1|2|U|513
7ZW0|1|2|G|514
7ZW0|1|2|A|515
7ZW0|1|2|G|516
*
7ZW0|1|2|C|536
7ZW0|1|2|G|537
7ZW0|1|2|A|538
7ZW0|1|2|G|539
7ZW0|1|2|G|540
7ZW0|1|2|A|541
7ZW0|1|2|A|542
7ZW0|1|2|C|543
7ZW0|1|2|A|544
7ZW0|1|2|A|545
7ZW0|1|2|U|546
*
7ZW0|1|2|A|592
7ZW0|1|2|U|593
7ZW0|1|2|A|594
7ZW0|1|2|G|595

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sW

40S ribosomal protein S9-A

Chain sc

40S ribosomal protein S23-A

Chain sg

40S ribosomal protein S30-A