J5_7ZW0_005

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACUUUG*UUUCCU*ACUUU*AUAGAAUAGGA*UAAUGAU

Length

35 nucleotides

Bulged bases

7ZW0|1|2|U|639, 7ZW0|1|2|U|694, 7ZW0|1|2|C|696, 7ZW0|1|2|C|697, 7ZW0|1|2|U|813, 7ZW0|1|2|G|815, 7ZW0|1|2|A|856

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZW0|1|2|A|636
7ZW0|1|2|C|637
7ZW0|1|2|U|638
7ZW0|1|2|U|639
7ZW0|1|2|U|640
7ZW0|1|2|G|641
*
7ZW0|1|2|U|693
7ZW0|1|2|U|694
7ZW0|1|2|U|695
7ZW0|1|2|C|696
7ZW0|1|2|C|697
7ZW0|1|2|U|698
*
7ZW0|1|2|A|740
7ZW0|1|2|C|741
7ZW0|1|2|U|742
7ZW0|1|2|U|743
7ZW0|1|2|U|744
*
7ZW0|1|2|A|807
7ZW0|1|2|U|808
7ZW0|1|2|A|809
7ZW0|1|2|G|810
7ZW0|1|2|A|811
7ZW0|1|2|A|812
7ZW0|1|2|U|813
7ZW0|1|2|A|814
7ZW0|1|2|G|815
7ZW0|1|2|G|816
7ZW0|1|2|A|817
*
7ZW0|1|2|U|854
7ZW0|1|2|A|855
7ZW0|1|2|A|856
7ZW0|1|2|U|857
7ZW0|1|2|G|858
7ZW0|1|2|A|859
7ZW0|1|2|U|860

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LU

60S ribosomal protein L19-A

Chain sU

40S ribosomal protein S7-A

Chain sX

40S ribosomal protein S11-A

Chain sY

40S ribosomal protein S13

Chain sb

40S ribosomal protein S22-A