J5_7ZW0_007
3D structure
- PDB id
- 7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- FAP-80S Complex - Rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GC*GCAGAUC
- Length
- 23 nucleotides
- Bulged bases
- 7ZW0|1|LA|U|1436
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7ZW0_007 not in the Motif Atlas
- Homologous match to J5_8P9A_011
- Geometric discrepancy: 0.0392
- The information below is about J5_8P9A_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_08384.1
- Basepair signature
- cWW-tSH-tSS-tHW-F-cWS-F-tWS-cWW-cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7ZW0|1|LA|G|658
7ZW0|1|LA|G|659
7ZW0|1|LA|A|660
7ZW0|1|LA|G|661
7ZW0|1|LA|U|662
7ZW0|1|LA|C|663
*
7ZW0|1|LA|G|799
7ZW0|1|LA|G|800
7ZW0|1|LA|A|801
7ZW0|1|LA|C|802
*
7ZW0|1|LA|G|941
7ZW0|1|LA|U|942
7ZW0|1|LA|U|943
7ZW0|1|LA|C|944
*
7ZW0|1|LA|G|1375
7ZW0|1|LA|C|1376
*
7ZW0|1|LA|G|1431
7ZW0|1|LA|C|1432
7ZW0|1|LA|A|1433
7ZW0|1|LA|G|1434
7ZW0|1|LA|A|1435
7ZW0|1|LA|U|1436
7ZW0|1|LA|C|1437
Current chains
- Chain LA
- 25S ribosomal RNA (RDN25-1)
Nearby chains
- Chain LD
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LG
- 60S ribosomal protein L4-A
- Chain LO
- 60S ribosomal protein L13-A
- Chain LQ
- 60S ribosomal protein L15-A
- Chain Ld
- 60S ribosomal protein L28
- Chain Lh
- 60S ribosomal protein L32
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