J5_7ZW0_011
3D structure
- PDB id
- 7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- FAP-80S Complex - Rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UUGA*UUUG*CA*UG*CAGAAAA
- Length
- 19 nucleotides
- Bulged bases
- 7ZW0|1|LA|G|2418, 7ZW0|1|LA|A|2799, 7ZW0|1|LA|G|2800, 7ZW0|1|LA|A|2801, 7ZW0|1|LA|A|2802
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7ZW0_011 not in the Motif Atlas
- Homologous match to J5_8P9A_015
- Geometric discrepancy: 0.2446
- The information below is about J5_8P9A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_96125.1
- Basepair signature
- cWW-cWH-cWH-tSS-cWW-cWW-cWW-F-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ZW0|1|LA|U|2416
7ZW0|1|LA|U|2417
7ZW0|1|LA|G|2418
7ZW0|1|LA|A|2419
*
7ZW0|1|LA|U|2611
7ZW0|1|LA|U|2612
7ZW0|1|LA|U|2613
7ZW0|1|LA|G|2614
*
7ZW0|1|LA|C|2627
7ZW0|1|LA|A|2628
*
7ZW0|1|LA|U|2650
7ZW0|1|LA|G|2651
*
7ZW0|1|LA|C|2798
7ZW0|1|LA|A|2799
7ZW0|1|LA|G|2800
7ZW0|1|LA|A|2801
7ZW0|1|LA|A|2802
7ZW0|1|LA|A|2803
7ZW0|1|LA|A|2804
Current chains
- Chain LA
- 25S ribosomal RNA (RDN25-1)
Nearby chains
- Chain LE
- 60S ribosomal protein L2-A
- Chain LQ
- 60S ribosomal protein L15-A
- Chain LT
- 60S ribosomal protein L18-A
- Chain LW
- 60S ribosomal protein L21-A
- Chain Ld
- 60S ribosomal protein L28
- Chain Le
- 60S ribosomal protein L29
- Chain Lr
- 60S ribosomal protein L42-A
- Chain sn
- Transfer RNA; tRNA
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