J5_8BUU_010
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 8BUU|1|A|A|2091, 8BUU|1|A|A|2477, 8BUU|1|A|U|2478, 8BUU|1|A|U|2614, 8BUU|1|A|U|2638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BUU|1|A|G|2086
8BUU|1|A|A|2087
8BUU|1|A|A|2088
8BUU|1|A|A|2089
8BUU|1|A|G|2090
8BUU|1|A|A|2091
8BUU|1|A|C|2092
8BUU|1|A|C|2093
*
8BUU|1|A|G|2475
8BUU|1|A|G|2476
8BUU|1|A|A|2477
8BUU|1|A|U|2478
8BUU|1|A|A|2479
8BUU|1|A|A|2480
8BUU|1|A|C|2481
8BUU|1|A|A|2482
*
8BUU|1|A|U|2529
8BUU|1|A|C|2530
8BUU|1|A|G|2531
8BUU|1|A|A|2532
8BUU|1|A|U|2533
8BUU|1|A|G|2534
8BUU|1|A|U|2535
*
8BUU|1|A|G|2612
8BUU|1|A|U|2613
8BUU|1|A|U|2614
8BUU|1|A|C|2615
8BUU|1|A|A|2616
8BUU|1|A|G|2617
*
8BUU|1|A|C|2635
8BUU|1|A|G|2636
8BUU|1|A|G|2637
8BUU|1|A|U|2638
8BUU|1|A|C|2639
8BUU|1|A|C|2640
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 9
- ExpZ
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
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