J5_8FIZ_008
3D structure
- PDB id
- 8FIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 8FIZ|1|BA|A|2062, 8FIZ|1|BA|A|2448, 8FIZ|1|BA|U|2449, 8FIZ|1|BA|U|2504, 8FIZ|1|BA|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FIZ|1|BA|G|2057
8FIZ|1|BA|A|2058
8FIZ|1|BA|A|2059
8FIZ|1|BA|A|2060
8FIZ|1|BA|G|2061
8FIZ|1|BA|A|2062
8FIZ|1|BA|C|2063
8FIZ|1|BA|C|2064
*
8FIZ|1|BA|G|2446
8FIZ|1|BA|G|2447
8FIZ|1|BA|A|2448
8FIZ|1|BA|U|2449
8FIZ|1|BA|A|2450
8FIZ|1|BA|A|2451
8FIZ|1|BA|C|2452
8FIZ|1|BA|A|2453
*
8FIZ|1|BA|U|2500
8FIZ|1|BA|C|2501
8FIZ|1|BA|G|2502
8FIZ|1|BA|A|2503
8FIZ|1|BA|U|2504
8FIZ|1|BA|G|2505
8FIZ|1|BA|U|2506
8FIZ|1|BA|C|2507
*
8FIZ|1|BA|G|2582
8FIZ|1|BA|G|2583
8FIZ|1|BA|U|2584
8FIZ|1|BA|U|2585
8FIZ|1|BA|U|2586
8FIZ|1|BA|A|2587
8FIZ|1|BA|G|2588
*
8FIZ|1|BA|C|2606
8FIZ|1|BA|G|2607
8FIZ|1|BA|G|2608
8FIZ|1|BA|U|2609
8FIZ|1|BA|C|2610
8FIZ|1|BA|C|2611
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BB
- Transfer RNA; tRNA
- Chain BD
- 50S ribosomal protein L2
- Chain BE
- 50S ribosomal protein L3
- Chain BF
- 50S ribosomal protein L4
- Chain BM
- 50S ribosomal protein L32
- Chain BT
- 50S ribosomal protein L15
- Chain BU
- 50S ribosomal protein L16
- Chain BZ
- 50S ribosomal protein L22
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