J5_8FOM_016
3D structure
- PDB id
- 8FOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.58 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGCAAG*CAAAG
- Length
- 24 nucleotides
- Bulged bases
- 8FOM|1|YA|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FOM|1|YA|C|601
8FOM|1|YA|G|602
8FOM|1|YA|A|603
8FOM|1|YA|G|604
*
8FOM|1|YA|C|624
8FOM|1|YA|G|625
8FOM|1|YA|U|626
8FOM|1|YA|A|627
8FOM|1|YA|G|628
*
8FOM|1|YA|C|635
8FOM|1|YA|G|636
8FOM|1|YA|A|637
8FOM|1|YA|G|638
*
8FOM|1|YA|C|650
8FOM|1|YA|G|651
8FOM|1|YA|C|652
8FOM|1|YA|A|653
8FOM|1|YA|A|654
8FOM|1|YA|G|654|||A
*
8FOM|1|YA|C|654|||T
8FOM|1|YA|A|654|||U
8FOM|1|YA|A|654|||V
8FOM|1|YA|A|655
8FOM|1|YA|G|656
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y8
- 50S ribosomal protein L35
- Chain YF
- 50S ribosomal protein L4
- Chain YP
- 50S ribosomal protein L15
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