J5_8FON_020
3D structure
- PDB id
- 8FON (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUCU
- Length
- 35 nucleotides
- Bulged bases
- 8FON|1|RA|A|2062, 8FON|1|RA|A|2448, 8FON|1|RA|U|2449, 8FON|1|RA|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FON|1|RA|A|2057
8FON|1|RA|A|2058
8FON|1|RA|A|2059
8FON|1|RA|A|2060
8FON|1|RA|G|2061
8FON|1|RA|A|2062
8FON|1|RA|C|2063
8FON|1|RA|C|2064
*
8FON|1|RA|G|2446
8FON|1|RA|G|2447
8FON|1|RA|A|2448
8FON|1|RA|U|2449
8FON|1|RA|A|2450
8FON|1|RA|A|2451
8FON|1|RA|C|2452
8FON|1|RA|A|2453
*
8FON|1|RA|U|2500
8FON|1|RA|C|2501
8FON|1|RA|G|2502
8FON|1|RA|A|2503
8FON|1|RA|U|2504
8FON|1|RA|G|2505
8FON|1|RA|U|2506
*
8FON|1|RA|G|2583
8FON|1|RA|U|2584
8FON|1|RA|U|2585
8FON|1|RA|C|2586
8FON|1|RA|A|2587
8FON|1|RA|G|2588
*
8FON|1|RA|C|2606
8FON|1|RA|G|2607
8FON|1|RA|G|2608
8FON|1|RA|U|2609
8FON|1|RA|C|2610
8FON|1|RA|U|2611
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain QV
- Transfer RNA; tRNA
- Chain R5
- 50S ribosomal protein L32
- Chain RD
- 50S ribosomal protein L2
- Chain RE
- 50S ribosomal protein L3
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
- Chain RQ
- 50S ribosomal protein L16
- Chain RW
- 50S ribosomal protein L22
- Chain Z6
- CC-puro
Coloring options: