J5_8G60_010

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CGCUC*GGG*UG*CCG*CG

Length

15 nucleotides

Bulged bases

8G60|1|S2|G|126, 8G60|1|S2|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|S2|C|125
8G60|1|S2|G|126
8G60|1|S2|C|127
8G60|1|S2|U|128
8G60|1|S2|C|129
*
8G60|1|S2|G|183
8G60|1|S2|G|184
8G60|1|S2|G|185
*
8G60|1|S2|U|214
8G60|1|S2|G|215
*
8G60|1|S2|C|310
8G60|1|S2|C|311
8G60|1|S2|G|312
*
8G60|1|S2|C|337
8G60|1|S2|G|338

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

eS4

Chain SG

eS6

Chain SI

eS8