J5_8JSH_002

3D structure

PDB id

8JSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-body-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CUGG*CGUGUA*UACUUUCAG*CAGAAGAAG*CAAG

Length

32 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSH|1|g|C|36
8JSH|1|g|U|37
8JSH|1|g|G|38
8JSH|1|g|G|39
*
8JSH|1|g|C|403
8JSH|1|g|G|404
8JSH|1|g|U|405
8JSH|1|g|G|406
8JSH|1|g|U|407
8JSH|1|g|A|408
*
8JSH|1|g|U|434
8JSH|1|g|A|435
8JSH|1|g|C|436
8JSH|1|g|U|437
8JSH|1|g|U|438
8JSH|1|g|U|439
8JSH|1|g|C|440
8JSH|1|g|A|441
8JSH|1|g|G|442
*
8JSH|1|g|C|492
8JSH|1|g|A|493
8JSH|1|g|G|494
8JSH|1|g|A|495
8JSH|1|g|A|496
8JSH|1|g|G|497
8JSH|1|g|A|498
8JSH|1|g|A|499
8JSH|1|g|G|500
*
8JSH|1|g|C|545
8JSH|1|g|A|546
8JSH|1|g|A|547
8JSH|1|g|G|548

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S4

Chain t

Small ribosomal subunit protein uS12