J5_8JSH_003

3D structure

PDB id

8JSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-body-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GACU*AGGCAG

Length

25 nucleotides

Bulged bases

8JSH|1|g|A|109, 8JSH|1|g|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSH|1|g|C|58
8JSH|1|g|A|59
8JSH|1|g|A|60
8JSH|1|g|G|61
*
8JSH|1|g|C|106
8JSH|1|g|G|107
8JSH|1|g|G|108
8JSH|1|g|A|109
8JSH|1|g|C|110
8JSH|1|g|G|111
8JSH|1|g|G|112
8JSH|1|g|G|113
*
8JSH|1|g|C|314
8JSH|1|g|A|315
8JSH|1|g|C|316
*
8JSH|1|g|G|337
8JSH|1|g|A|338
8JSH|1|g|C|339
8JSH|1|g|U|340
*
8JSH|1|g|A|349
8JSH|1|g|G|350
8JSH|1|g|G|351
8JSH|1|g|C|352
8JSH|1|g|A|353
8JSH|1|g|G|354

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain 3

30S ribosomal protein S20

Chain y

30S ribosomal protein S16