J5_8OEQ_013
3D structure
- PDB id
- 8OEQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AAAG
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OEQ|1|B|C|31
8OEQ|1|B|U|32
8OEQ|1|B|U|33
8OEQ|1|B|G|34
8OEQ|1|B|U|35
*
8OEQ|1|B|A|471
8OEQ|1|B|A|472
8OEQ|1|B|A|473
8OEQ|1|B|U|474
8OEQ|1|B|A|475
8OEQ|1|B|A|476
8OEQ|1|B|C|477
*
8OEQ|1|B|G|507
8OEQ|1|B|G|508
8OEQ|1|B|A|509
8OEQ|1|B|A|510
8OEQ|1|B|U|511
8OEQ|1|B|G|512
8OEQ|1|B|A|513
8OEQ|1|B|G|514
*
8OEQ|1|B|C|534
8OEQ|1|B|G|535
8OEQ|1|B|A|536
8OEQ|1|B|G|537
8OEQ|1|B|G|538
8OEQ|1|B|A|539
8OEQ|1|B|A|540
8OEQ|1|B|C|541
8OEQ|1|B|A|542
8OEQ|1|B|A|543
8OEQ|1|B|U|544
*
8OEQ|1|B|A|590
8OEQ|1|B|A|591
8OEQ|1|B|A|592
8OEQ|1|B|G|593
Current chains
- Chain B
- 18S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal protein S4
- Chain Z
- Ribosomal protein S23 (S12)
- Chain g
- 40S ribosomal protein S30
Coloring options: