J5_8OLZ_001

3D structure

PDB id

8OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

UAUAG*CGAA*UUAG*CAAAC*GGAAA

Length

23 nucleotides

Bulged bases

8OLZ|1|A|A|245

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OLZ|1|A|U|24
8OLZ|1|A|A|25
8OLZ|1|A|U|26
8OLZ|1|A|A|27
8OLZ|1|A|G|28
*
8OLZ|1|A|C|40
8OLZ|1|A|G|41
8OLZ|1|A|A|42
8OLZ|1|A|A|43
*
8OLZ|1|A|U|65
8OLZ|1|A|U|66
8OLZ|1|A|A|67
8OLZ|1|A|G|68
*
8OLZ|1|A|C|119
8OLZ|1|A|A|120
8OLZ|1|A|A|121
8OLZ|1|A|A|122
8OLZ|1|A|C|123
*
8OLZ|1|A|G|243
8OLZ|1|A|G|244
8OLZ|1|A|A|245
8OLZ|1|A|A|246
8OLZ|1|A|A|247

Current chains

Chain A

DOMAINS 1-5

Nearby chains