J5_8P2H_008

3D structure

PDB id

8P2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CUGG*CGUG*CUGUUA*UCAGAAAG*CAAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2H|1|a|C|37
8P2H|1|a|U|38
8P2H|1|a|G|39
8P2H|1|a|G|40
*
8P2H|1|a|C|411
8P2H|1|a|G|412
8P2H|1|a|U|413
8P2H|1|a|G|414
*
8P2H|1|a|C|444
8P2H|1|a|U|445
8P2H|1|a|G|446
8P2H|1|a|U|447
8P2H|1|a|U|448
8P2H|1|a|A|449
*
8P2H|1|a|U|501
8P2H|1|a|C|502
8P2H|1|a|A|503
8P2H|1|a|G|504
8P2H|1|a|A|505
8P2H|1|a|A|506
8P2H|1|a|A|507
8P2H|1|a|G|508
*
8P2H|1|a|C|553
8P2H|1|a|A|554
8P2H|1|a|A|555
8P2H|1|a|G|556

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain e

30S ribosomal protein S4

Chain m

30S ribosomal protein S12