J5_8P85_012
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAG*CGUAA*UGAACGUAG*CGA*UAAGAG
- Length
- 27 nucleotides
- Bulged bases
- 8P85|1|AR|U|719, 8P85|1|AR|A|784, 8P85|1|AR|G|785
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8P85|1|AR|C|675
8P85|1|AR|G|676
8P85|1|AR|A|677
8P85|1|AR|G|678
*
8P85|1|AR|C|702
8P85|1|AR|G|703
8P85|1|AR|U|704
8P85|1|AR|A|705
8P85|1|AR|A|706
*
8P85|1|AR|U|713
8P85|1|AR|G|714
8P85|1|AR|A|715
8P85|1|AR|A|716
8P85|1|AR|C|717
8P85|1|AR|G|718
8P85|1|AR|U|719
8P85|1|AR|A|720
8P85|1|AR|G|721
*
8P85|1|AR|C|749
8P85|1|AR|G|750
8P85|1|AR|A|751
*
8P85|1|AR|U|782
8P85|1|AR|A|783
8P85|1|AR|A|784
8P85|1|AR|G|785
8P85|1|AR|A|786
8P85|1|AR|G|787
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CF
- 60S ribosomal protein L4-A
- Chain CN
- 60S ribosomal protein L13-A
- Chain CS
- 60S ribosomal protein L18-A
- Chain DC
- 60S ribosomal protein L28
- Chain DD
- 60S ribosomal protein L29
- Chain DK
- 60S ribosomal protein L36-A
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