J5_8PEG_010

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

G(4SU)GG*CGC*GUA*UCC*GC

Length

15 nucleotides

Bulged bases

8PEG|1|X|4SU|8, 8PEG|1|X|C|65

QA status

Modified nucleotides: 4SU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PEG|1|X|G|7
8PEG|1|X|4SU|8
8PEG|1|X|G|9
8PEG|1|X|G|10
*
8PEG|1|X|C|26
8PEG|1|X|G|27
8PEG|1|X|C|28
*
8PEG|1|X|G|44
8PEG|1|X|U|45
8PEG|1|X|A|46
*
8PEG|1|X|U|64
8PEG|1|X|C|65
8PEG|1|X|C|66
*
8PEG|1|X|G|82
8PEG|1|X|C|83

Current chains

Chain X

tRNA-Ser (E-site)

Nearby chains

Chain G

30S ribosomal protein S7

Chain a

Large ribosomal subunit protein uL1

Chain g

50S ribosomal protein L33